JOURNAL ARTICLE

Cuproptosis- and m6A-Related lncRNAs for Prognosis of Hepatocellular Carcinoma

Yuezhi ZhuJen Kit TanJo Aan Goon

Year: 2023 Journal:   Biology Vol: 12 (8)Pages: 1101-1101   Publisher: Multidisciplinary Digital Publishing Institute

Abstract

Cuproptosis and N6-methyladenosine (m6A) have potential as prognostic predictors in cancer patients, but their roles in hepatocellular carcinoma (HCC) are unclear. This study aimed to screen a total of 375 HCC samples were retrieved from the TCGA database, and lncRNAs related to cuproptosis and m6A were obtained through correlation analysis. To construct a risk assessment model, univariate Cox regression analysis and LASSO Cox regression were employed. Analyze the regulatory effect of relevant risk assessment models on tumor mutation load (TMB) and immune microenvironment. A total of five lncRNAs (AC007405.3, AL031985.3, TMCC1-AS1, MIR210HG, TMEM220-AS1) with independent overall survival-related risk models were obtained by LASSO survival regression. TP53 and CTNNB1 were the three genes found to have the most mutations in high-risk group patients. The high-risk group with low TMB had the worst survival, whereas the low-risk group with high TMB had the best survival. KEGG pathway analysis revealed that the high-risk group was enriched with cell cycle, oocyte meiosis, cell senescence, and glycolysis/glucose production pathways. We constructed a reliable cuproptosis- and m6A-related lncRNA model for the prognosis of HCC. The model may provide new insights into managing HCC patients, but further research is needed to validate it.

Keywords:
Biology Proportional hazards model Hepatocellular carcinoma KEGG Oncology Cell cycle Univariate Internal medicine Lasso (programming language) Survival analysis Bioinformatics Cancer Gene Cancer research Transcriptome Genetics Multivariate statistics Gene expression Medicine

Metrics

8
Cited By
1.49
FWCI (Field Weighted Citation Impact)
39
Refs
0.81
Citation Normalized Percentile
Is in top 1%
Is in top 10%

Citation History

Topics

RNA modifications and cancer
Life Sciences →  Biochemistry, Genetics and Molecular Biology →  Molecular Biology
Cancer-related molecular mechanisms research
Life Sciences →  Biochemistry, Genetics and Molecular Biology →  Cancer Research
Cholangiocarcinoma and Gallbladder Cancer Studies
Health Sciences →  Medicine →  Surgery
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