JOURNAL ARTICLE

A dynamic reaction picklist for improving allergy reaction documentation in the electronic health record

Abstract

Abstract Objective Incomplete and static reaction picklists in the allergy module led to free-text and missing entries that inhibit the clinical decision support intended to prevent adverse drug reactions. We developed a novel, data-driven, “dynamic” reaction picklist to improve allergy documentation in the electronic health record (EHR). Materials and Methods We split 3 decades of allergy entries in the EHR of a large Massachusetts healthcare system into development and validation datasets. We consolidated duplicate allergens and those with the same ingredients or allergen groups. We created a reaction value set via expert review of a previously developed value set and then applied natural language processing to reconcile reactions from structured and free-text entries. Three association rule-mining measures were used to develop a comprehensive reaction picklist dynamically ranked by allergen. The dynamic picklist was assessed using recall at top k suggested reactions, comparing performance to the static picklist. Results The modified reaction value set contained 490 reaction concepts. Among 4 234 327 allergy entries collected, 7463 unique consolidated allergens and 469 unique reactions were identified. Of the 3 dynamic reaction picklists developed, the 1 with the optimal ranking achieved recalls of 0.632, 0.763, and 0.822 at the top 5, 10, and 15, respectively, significantly outperforming the static reaction picklist ranked by reaction frequency. Conclusion The dynamic reaction picklist developed using EHR data and a statistical measure was superior to the static picklist and suggested proper reactions for allergy documentation. Further studies might evaluate the usability and impact on allergy documentation in the EHR.

Keywords:
Documentation Computer science Usability Set (abstract data type) Ranking (information retrieval) Electronic health record Value (mathematics) Drug reaction Data mining Medicine Information retrieval Machine learning Health care Programming language

Metrics

22
Cited By
3.08
FWCI (Field Weighted Citation Impact)
25
Refs
0.89
Citation Normalized Percentile
Is in top 1%
Is in top 10%

Citation History

Topics

Pharmacovigilance and Adverse Drug Reactions
Life Sciences →  Pharmacology, Toxicology and Pharmaceutics →  Toxicology
Computational Drug Discovery Methods
Physical Sciences →  Computer Science →  Computational Theory and Mathematics
Pharmacogenetics and Drug Metabolism
Life Sciences →  Pharmacology, Toxicology and Pharmaceutics →  Pharmacology

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JOURNAL ARTICLE

Expanding the reaction picklist in electronic health records improves allergy documentation

Sheril VargheseLiqin WangSuzanne V. BlackleyKimberly G. BlumenthalFoster GossLi Zhou

Journal:   The Journal of Allergy and Clinical Immunology In Practice Year: 2022 Vol: 10 (10)Pages: 2768-2771.e2
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