DATA-GRU: Dual-Attention Time-Aware Gated Recurrent Unit for Irregular Multivariate Time Series

Abstract

Due to the discrepancy of diseases and symptoms, patients usually visit hospitals irregularly and different physiological variables are examined at each visit, producing large amounts of irregular multivariate time series (IMTS) data with missing values and varying intervals. Existing methods process IMTS into regular data so that standard machine learning models can be employed. However, time intervals are usually determined by the status of patients, while missing values are caused by changes in symptoms. Therefore, we propose a novel end-to-end Dual-Attention Time-Aware Gated Recurrent Unit (DATA-GRU) for IMTS to predict the mortality risk of patients. In particular, DATA-GRU is able to: 1) preserve the informative varying intervals by introducing a time-aware structure to directly adjust the influence of the previous status in coordination with the elapsed time, and 2) tackle missing values by proposing a novel dual-attention structure to jointly consider data-quality and medical-knowledge. A novel unreliability-aware attention mechanism is designed to handle the diversity in the reliability of different data, while a new symptom-aware attention mechanism is proposed to extract medical reasons from original clinical records. Extensive experimental results on two real-world datasets demonstrate that DATA-GRU can significantly outperform state-of-the-art methods and provide meaningful clinical interpretation.