JOURNAL ARTICLE

Monotonicity of Kinetic Proofreading

Abstract

This manuscript studies the monotonicity of multi-step ligand-receptor signalling motifs. Monotonicity with respect to parameters and state perturbations allow not only to exclude periodic solutions, but also to easily bound the responses in cases of bounded perturbations. In classical coordinates, multi-step ligand-receptor signalling motifs are known not to be monotone. However, a generic coordinate transform allows for deriving conditions on the kinetic rate constants such that the signal is monotonously affected by perturbations to any one of the kinetic rate constants. The result is illustrated at the hand of a model of kinetic proofreading.

Keywords:
Proofreading Monotonic function Kinetic energy Computer science Mathematics Econometrics Chemistry Physics Mathematical analysis Biochemistry

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Citation History

Topics

Viral Infectious Diseases and Gene Expression in Insects
Life Sciences →  Biochemistry, Genetics and Molecular Biology →  Molecular Biology
Protein Structure and Dynamics
Life Sciences →  Biochemistry, Genetics and Molecular Biology →  Molecular Biology
Gene Regulatory Network Analysis
Life Sciences →  Biochemistry, Genetics and Molecular Biology →  Molecular Biology

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